组蛋白赖氨酸转移酶KAT6B基因shRNA慢病毒载体的构建与鉴定

doi:10.11904/j.issn.1002-3070.2018.01.001

实用肿瘤学杂志 ›› 2018, Vol. 32 ›› Issue (1): 1-6.doi: 10.11904/j.issn.1002-3070.2018.01.001

• 基础研究 • 下一篇

组蛋白赖氨酸转移酶KAT6B基因shRNA慢病毒载体的构建与鉴定

靳俊杰^1,2, 安静^1,2, 曹涤非^1,2,3, 宋爱利⁴, 赵丽丽⁴, 刘兆良^1,2

1.哈尔滨医科大学附属肿瘤医院肿瘤防治研究所(哈尔滨 150081);
2.黑龙江省医学科学院肿瘤防治研究所;
3.黑龙江省科学院高技术研究院;
4.哈尔滨工业大学化工与化学学院

收稿日期:2017-07-17 出版日期:2018-02-20 发布日期:2018-03-07
通讯作者: 刘兆良,E-mail:zliu_hrbmu@163.com
作者简介:靳俊杰,男,(1991-),硕士研究生,从事乳腺肿瘤的基础研究。
基金资助:
国家自然科学基金(面上项目)(81472636);黑龙江省自然科学基金(省留学归国人员科学基金)(LC2015033)

Construction and identification of shRNA lentiviral vectors targeting histone lysine transferase KAT6B gene

JIN Junjie^1,2, AN Jing^1,2, CAO Difei^1,2,3, SONG Aili⁴, ZHAO Lili⁴, LIU Zhaoliang^1,2

1.Institute of Cancer Prevention and Treatment,Harbin Medical University Cancer Hospital,Harbin 150081,China;
2.Institute of Cancer Prevention and Treatment,Heilongjiang Academy of Medical Sciences;
3.High-Tech Research Institute,Heilongjiang Academy of Sciences;
4.School of Chemical Engineering and Chemical Engineering,Harbin Institute of Technology

Received:2017-07-17 Online:2018-02-20 Published:2018-03-07

摘要/Abstract

摘要：

目的在乳腺癌细胞T47D中利用构建的短发卡RNA(shRNA)慢病毒载体对赖氨酸乙酰转移酶6B(KAT6B/MORF)基因进行RNA干扰,通过下调该基因的表达来研究其对乳腺癌细胞的抑制功能。方法针对KAT6B基因的CDS区合成2对单链的短发卡RNA(shRNA5、shRNA8)及相应的对照组序列(Scramble5、Scramble8),通过聚合酶链式反应(PCR)扩增后,与双酶切(EcoRl、Xhol)线性化处理的入门载体(pENTR/pSM2(CMV)GFP)同源重组,获得含有目的片段的入门克隆。再通过Gateway系统的LR克隆反应,将目的片段重组到目的载体(pLenti x1 puro DEST)上。利用慢病毒包装系统,将慢病毒包装质粒分别与构建好的两对目的质粒共转染到HEK-293T细胞中,收集病毒上清,转导乳腺癌细胞T47D。最后,通过免疫印迹法(Western blot)检测KAT6B的表达。结果对转化获得的单菌落进行测序鉴定,与目标序列完全一致,表明已经成功构建慢病毒载体。Western blot结果显示KAT6B基因的蛋白表达量在每组shRNA中都比相应的对照组显著降低,表明构建的基因沉默载体在乳腺癌细胞T47D中对KAT6B基因具有基因沉默作用。结论本研究通过构建KAT6B基因的shRNA慢病毒基因沉默载体,在乳腺癌细胞T47D中对KAT6B基因进行RNA干扰的研究,为进一步研究KAT6B基因在乳腺癌中发挥肿瘤抑制作用奠定了基础。

关键词: 载体构建, 基因沉默, RNA干扰, KAT6B, 慢病毒载体

Abstract:

Objective The aims of this study were to construct short hairpin RNA(shRNA)lentiviral vector in breast cancer T47D cells,to carry out RNA interference on lysine acetyltransferase 6B(KAT6B/MORF)gene,to down-regulate its expression and to explore its function. Methods Two pairs of single-stranded short hairpin RNA(shRNA5 and shRNA8)and the corresponding control sequences(Scramble5 and Scramble8)were synthesized based on the CDS of KAT6B gene.Polymerase chain reaction(PCR)was used to amplify double-stranded and ligated with the entry vector(pENTR/pSM2(CMV)GFP),which were subjected to a double digestion(EcoRl and Xhol)linearization and homologous recombination with the entry vector(pENTR/pSM₂(CMV)GFP)to obtain an entry clone containing the desired fragment.The target fragment was recombined onto the target vector(pLenti x1 puro DEST)via the LR cloning reaction of the Gateway system.The lentiviral packaging plasmids were co-transfected into HEK-293T cells with two pairs of target plasmids.The supernatant of HEK-293T cells was collected and transformed into T47D cells.The expression of KAT6B protein was detected in T47D cells by Western blot. Results The single colony obtained from the transformation was identified by sequencing,which was consistent with the target sequence,indicating that the lentiviral vector had been successfully constructed.The expression of KAT6B protein was significantly lower in the shRNA KAT6B group than that in the control group,which indicated that the constructed gene silencing vector could play a role in the KAT6B gene in T47D cells. Conclusion The shRNA lentiviral gene silencing vectors of KAT6B were constructed and identified in T47D cells,which indicated that the foundation for further study KAT6B gene plays an inhibitory effect on breast cancer.

Key words: Vector construction, Gene silence, RNA interference, KAT6B, Lentiviral vector

中图分类号:

R737.9

靳俊杰, 安静, 曹涤非, 宋爱利, 赵丽丽, 刘兆良. 组蛋白赖氨酸转移酶KAT6B基因shRNA慢病毒载体的构建与鉴定[J]. 实用肿瘤学杂志, 2018, 32(1): 1-6.

JIN Junjie, AN Jing, CAO Difei, SONG Aili, ZHAO Lili, LIU Zhaoliang. Construction and identification of shRNA lentiviral vectors targeting histone lysine transferase KAT6B gene[J]. PRACTICAL ONCOLOGY JOURNAL, 2018, 32(1): 1-6.

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组蛋白赖氨酸转移酶KAT6B基因shRNA慢病毒载体的构建与鉴定

Construction and identification of shRNA lentiviral vectors targeting histone lysine transferase KAT6B gene

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